BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A06LP1|AL425961
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig750 1679 0.0
>3x_Contig750
Length = 2436
Score = 1679 bits (847), Expect = 0.0
Identities = 849/850 (99%)
Strand = Plus / Plus
Query: 1 gaagtncccgaatctagcacttctgatgaagcaaagaactctgaatccgaagaggaaacc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 gaagttcccgaatctagcacttctgatgaagcaaagaactctgaatccgaagaggaaacc 1499
Query: 61 tcccaagaaacgcatgctgatgaggaacagaatgaacaagtcttcactcgtaactcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 tcccaagaaacgcatgctgatgaggaacagaatgaacaagtcttcactcgtaactcagaa 1559
Query: 121 gtccgttctaagttgactgatctatccaagatcttaaaggccaacgaagaatacgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 gtccgttctaagttgactgatctatccaagatcttaaaggccaacgaagaatacgaaaat 1619
Query: 181 ggttcttactattacagagtcaaacttgtgcgtgaagaattgatcagaagaaaggaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 ggttcttactattacagagtcaaacttgtgcgtgaagaattgatcagaagaaaggaagaa 1679
Query: 241 gttatcaagttagaaaaggaagctgctgaaattagagctaagagtaacgctgaacgcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gttatcaagttagaaaaggaagctgctgaaattagagctaagagtaacgctgaacgcaag 1739
Query: 301 aagagaagcgaagaagaaaacaagattcttgccaagaaggctctagaagaaaggcaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 aagagaagcgaagaagaaaacaagattcttgccaagaaggctctagaagaaaggcaaaga 1799
Query: 361 cgtatggctgaggaaaaggctgctgttgaatcttctatggagaaagaagcggaacgtcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 cgtatggctgaggaaaaggctgctgttgaatcttctatggagaaagaagcggaacgtcgt 1859
Query: 421 gctgaagaaatgatggaacgtgagagagaagcgatccatgaacaagaaatgaagaagttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 gctgaagaaatgatggaacgtgagagagaagcgatccatgaacaagaaatgaagaagttg 1919
Query: 481 attgctgaaactaatgccaatggtgtcattcatattgatccaaaggaagccaagaaccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1920 attgctgaaactaatgccaatggtgtcattcatattgatccaaaggaagccaagaaccta 1979
Query: 541 acaagtgataagatcaaccaaatggtcattgaacaagtagccaagaacaagaaggatttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 acaagtgataagatcaaccaaatggtcattgaacaagtagccaagaacaagaaggatttg 2039
Query: 601 actgaacgtatgacctatgccttcaagaagttagatcacctggaaagagcctatagacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 actgaacgtatgacctatgccttcaagaagttagatcacctggaaagagcctatagacaa 2099
Query: 661 atggaattgccattgttagaaaaggacgctgaagagcaaaaaaagagggatagagagaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 atggaattgccattgttagaaaaggacgctgaagagcaaaaaaagagggatagagagaat 2159
Query: 721 tacgacaatttcaagaagaagttaattgagacttccaaggccgactatgaaaagaaattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 tacgacaatttcaagaagaagttaattgagacttccaaggccgactatgaaaagaaattg 2219
Query: 781 gctctacatcaacgtttgaacaaaatctacagtactttcaaccaatacaagtcatctgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 gctctacatcaacgtttgaacaaaatctacagtactttcaaccaatacaagtcatctgtt 2279
Query: 841 atcgctgaaa 850
||||||||||
Sbjct: 2280 atcgctgaaa 2289
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8483
Number of Sequences: 1807
Number of extensions: 8483
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)